miREval 2.0: a web tool for simple microRNA prediction in genome sequences

Gao, Dadi; Middleton, Robert; Rasko, John E. J.; Ritchie, William

doi:10.1093/bioinformatics/btt545

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Research Article| September 18 2013

miREval 2.0: a web tool for simple microRNA prediction in genome sequences

Publishing Partner: Oxford University Press

Dadi Gao;

Dadi Gao

¹Bioinformatics Laboratory, Centenary Institute, ²Gene and Stem Cell Therapy Program, Centenary Institute, University of Sydney, Sydney, New South Wales, Australia and ³Cell and Molecular Therapies, Royal Prince Alfred Hospital, Camperdown, New South Wales 2050, Australia

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Robert Middleton;

Robert Middleton

¹Bioinformatics Laboratory, Centenary Institute, ²Gene and Stem Cell Therapy Program, Centenary Institute, University of Sydney, Sydney, New South Wales, Australia and ³Cell and Molecular Therapies, Royal Prince Alfred Hospital, Camperdown, New South Wales 2050, Australia

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John E. J. Rasko;

John E. J. Rasko

¹Bioinformatics Laboratory, Centenary Institute, ²Gene and Stem Cell Therapy Program, Centenary Institute, University of Sydney, Sydney, New South Wales, Australia and ³Cell and Molecular Therapies, Royal Prince Alfred Hospital, Camperdown, New South Wales 2050, Australia

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William Ritchie

William Ritchie *

¹Bioinformatics Laboratory, Centenary Institute, ²Gene and Stem Cell Therapy Program, Centenary Institute, University of Sydney, Sydney, New South Wales, Australia and ³Cell and Molecular Therapies, Royal Prince Alfred Hospital, Camperdown, New South Wales 2050, Australia

*To whom correspondence should be addressed.

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Funders:

National Institutes of Health

Funder: National Institutes of Health

Funder ID: 10.13039/100000002

Award/Grant ID: NO AWARD

Author & Article Information

*To whom correspondence should be addressed.

Associate Editor: Alfonso Valencia

Publisher: Oxford University Press

Received: July 01 2013

Revision Received: August 26 2013

Accepted: September 13 2013

Online ISSN: 1367-4811

Print ISSN: 1367-4803

Funders

Funder: National Institutes of Health

Funder ID: 10.13039/100000002

Award/Grant ID: NO AWARD

2013

Publisher: Oxford University Press

Publication: Bioinformatics

Bioinformatics (2013) 29 (24): 3225–3226.

https://doi.org/10.1093/bioinformatics/btt545

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Abstract

Result: We have developed miREval 2.0, an online tool that can simultaneously search up to 100 sequences for novel microRNAs (miRNAs) in multiple organisms. miREval 2.0 uses multiple published in silico approaches to detect miRNAs in sequences of interest. This tool can be used to discover miRNAs from DNA sequences or to validate candidates from sequencing data.

Availability: http://mimirna.centenary.org.au/mireval/.

Contact: [email protected]

Supplementary information: Supplementary data are available at Bioinformatics online.

2013

miREval 2.0: a web tool for simple microRNA prediction in genome sequences

Abstract

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miREval 2.0: a web tool for simple microRNA prediction in genome sequences

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CONTACT US

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